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A-MADMAN: Annotation-based MicroArray DataMeta ANalysis tool 4 Oct 2010 | 12:05 am
A-MADMAN is an open source web application and gene chip analysis automation framework for annotation-based meta-analysis of data from public repositories (NCBI GEO).
Genomicus – a new synteny browser with broad phylogenic tree visualization 26 Apr 2010 | 09:48 pm
Comparative genomics study the evolution of gene organization, which in the past years was by the fast growing number of full genome sequences available in public repositories. Most of the available b...
Genomicus – a new synteny browser with broad phylogenic tree visualization 26 Apr 2010 | 05:48 pm
Comparative genomics study the evolution of gene organization, which in the past years was by the fast growing number of full genome sequences available in public repositories. Most of the available b...
BioEdit – sequence alignment editor 12 Sep 2009 | 09:00 pm
BioEdit is a mouse-driven, easy-to-use sequence alignment editor and sequence analysis program designed and written by a graduate student who knows how frustrating and time consuming it can be to rely...
NoteExpress – scientific information manager 11 Sep 2009 | 09:00 pm
NoteExpress is a perfect assistant and information manager for researchers, scholars, students, and librarians. NoteExpress is designed to help you organize research notes and bibliographic references...
FastPCR – an integrated tool for PCR primers design 10 Sep 2009 | 09:00 pm
The FastPCR software is an integrated tools environment that provides comprehensive facilities for designing any kind of PCR primers for standard, long distance, inverse, real-time PCR (LUX and self-r...
MAExplorer – MicroArray Explorer 7 Sep 2009 | 10:00 pm
The Microarray Explorer (MAExplorer) is a Java-based data-mining facility for microarray databases. It may be freely downloaded and run as a stand-alone application on your computer. The exploratory d...
Ondex – data integration platform 3 Sep 2009 | 10:00 pm
Gathering and managing data from diverse and heterogeneous datasets is central to many systems approaches to biology. Systems biologists need to easily identify and gather the information they require...
Avogadro – advanced molecular editor 3 Sep 2009 | 06:45 am
Avogadro is a new, open source molecular editor designed for cross-platform use in computational chemistry, molecular modeling, bioinformatics, materials science, and related areas. It offers flexible...
SOAP2: an improved ultrafast tool for short read alignment 5 Aug 2009 | 11:00 pm
SOAP2 is a significantly improved version of the short oligonucleotide alignment program that both reduces computer memory usage and increases alignment speed at an unprecedented rate. We used a Burro...